| 1. |  | AC Sparta Praha | 720 | 456 | 148 | 116 | 1350 | 559 | +791 | 1498 |
| 2. |  | SK Slavia Praha | 720 | 360 | 196 | 164 | 1144 | 700 | +444 | 1260 |
| 3. |  | FC Slovan Liberec | 720 | 317 | 204 | 199 | 979 | 767 | +212 | 1138 |
| 4. |  | FK Jablonec | 690 | 264 | 198 | 228 | 913 | 808 | +105 | 990 |
| 5. |  | FC Viktoria Plzeň | 600 | 264 | 150 | 186 | 858 | 692 | +166 | 930 |
| 6. |  | SK Sigma Olomouc | 660 | 254 | 182 | 224 | 838 | 761 | +77 | 921 |
| 7. |  | FK Teplice | 630 | 240 | 186 | 204 | 810 | 718 | +92 | 906 |
| 8. |  | FC Baník Ostrava | 690 | 238 | 204 | 248 | 892 | 874 | +18 | 904 |
| 9. |  | FC Zbrojovka Brno | 690 | 236 | 180 | 274 | 820 | 905 | -85 | 878 |
| 10. |  | 1.FK Příbram | 570 | 169 | 148 | 253 | 607 | 793 | -186 | 655 |
| 11. |  | FK Mladá Boleslav | 390 | 167 | 105 | 118 | 586 | 476 | +110 | 606 |
| 12. |  | SK Dynamo České Budějovice | 540 | 151 | 153 | 236 | 551 | 798 | -247 | 595 |
| 13. |  | 1.FC Slovácko | 450 | 143 | 121 | 186 | 502 | 572 | -70 | 538 |
| 14. |  | FK Viktoria Žižkov | 420 | 144 | 106 | 170 | 478 | 539 | -61 | 526 |
| 15. |  | Bohemians Praha 1905 | 450 | 120 | 125 | 205 | 433 | 635 | -202 | 477 |
| 16. |  | FC Hradec Králové | 420 | 105 | 113 | 202 | 374 | 601 | -227 | 419 |
| 17. |  | FC Fastav Zlín | 360 | 102 | 104 | 154 | 339 | 473 | -134 | 400 |
| 18. |  | FK Drnovice | 300 | 114 | 67 | 119 | 392 | 398 | -6 | 396 |
| 19. |  | FK Chmel Blšany | 240 | 67 | 63 | 110 | 255 | 350 | -95 | 264 |
| 20. |  | FK Dukla Praha | 210 | 63 | 64 | 83 | 263 | 293 | -30 | 252 |
| 21. |  | SFC Opava | 240 | 63 | 64 | 113 | 260 | 354 | -94 | 247 |
| 22. |  | FC Vysočina Jihlava | 180 | 47 | 55 | 78 | 191 | 267 | -76 | 196 |
| 23. |  | SK Kladno | 120 | 28 | 30 | 62 | 99 | 173 | -74 | 114 |
| 24. |  | FC Union Cheb | 90 | 29 | 26 | 35 | 95 | 121 | -26 | 100 |
| 25. |  | FK SIAD Most | 90 | 19 | 30 | 41 | 96 | 140 | -44 | 87 |
| 26. |  | FC Karviná | 60 | 12 | 12 | 36 | 53 | 105 | -52 | 48 |
| 27. |  | FK Bohemians Praha | 60 | 14 | 8 | 38 | 60 | 111 | -51 | 35 |
| 28. |  | MFK Karviná | 30 | 9 | 7 | 14 | 39 | 49 | -10 | 34 |
| 29. |  | 1.SC Znojmo FK | 30 | 6 | 9 | 15 | 32 | 49 | -17 | 27 |
| 30. |  | FK Ústí nad Labem | 30 | 4 | 7 | 19 | 22 | 67 | -45 | 19 |
| 31. |  | FC JOKO Slovácká Slavia Uherské Hradiště | 30 | 3 | 8 | 19 | 19 | 65 | -46 | 17 |
| 32. |  | FC Kovkor Vítkovice | 30 | 3 | 7 | 20 | 22 | 64 | -42 | 13 |
| 33. |  | FK ŠVARC Benešov | 30 | 3 | 3 | 24 | 23 | 78 | -55 | 12 |
| 34. |  | AFK Atl. Lázně Bohdaneč | 30 | 2 | 5 | 23 | 18 | 61 | -43 | 11 |
